We use advanced computational and database approaches to investigate microbial genomes and their evolution


Massive genome reduction predates the divergence of Symbiodiniaceae dinoflagellates
Shah et al. 2024. The ISME Journal 18: wrae059. DOIPubMedPDF


Nuclear genomes of dinoflagellates reveal evolutionarily conserved pattern of RNA editing relative to stress response
Chen Y et al. 2024. Frontiers in Protistology. 2: 1320917. DOIPDF


Contaminant or goldmine? In silico assessment of Symbiodiniaceae community using coral hologenomes
Ishida et al. 2024. Frontiers in Protistology 2: 1376877. DOIPDF


Genome-wide transcriptome analysis reveals the diversity and function of long non-coding RNAs in dinoflagellates
Chen Y et al. 2024. NAR Genomics and Bioinformatics 6: lqae016. DOIPubMedPDF


Facultative lifestyle drives diversity of coral algal symbionts
Bhattacharya D et al. 2024. Trends in Ecology and Evolution 39: 239-247. DOIPubMedPDF